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Genome Assembly:

1. Millet_scaffoldVersion2.3.fa.gz :  FTP

2. foxtail_millet.chr.fa.gz :  FTP

3. millet.agp :  FTP

4. millet.chr.No_Ns_gap_between_scaffolds.fa.tar.gz :  FTP

5. millet.chr.No_Ns_gap_between_scaffolds.rm.fa.tar.gz :  FTP


Gene annotation:

1. Millet.fa.glean.gff :  FTP

2. Millet.fa.glean.cds.gz :  FTP

3. Millet.fa.glean.pep.gz :  FTP


Putative orthologous groups OrthoMCL:

1. all_15_orthomcl.out :  FTP

2. all_orthomcl.out_5_grasses :  FTP

3. all_orthomcl_22_species.out :  FTP


Genetic markers and population:

1. 759_marker_primers.xlsx :  FTP

2. SV.fa :  FTP

3. indel.fa :  FTP

4. snp.fa :  FTP


Repeats annotation:

1. repeats_gff :  FTP


Transcriptomics and RNA-seq:

1. leaf.Gene.rpkm.xls :  FTP

2. root.Gene.rpkm.xls :  FTP

3. spica.Gene.rpkm.xls :  FTP

4. stem.Gene.rpkm.xls :  FTP


Functional annotation:

1. Millet.fa.glean.pep.iprscan.gene.GO :  FTP

2. Millet.fa.glean.pep.iprscan.gene.ipr :  FTP

3. Millet.fa.glean.pep.iprscan.gene.wego :  FTP

4. Millet.fa.glean.pep.kegg.blast.tab.best :  FTP

5. Millet.fa.glean.pep.swissprot.blast.tab.best.v2.0 :  FTP

6. Millet.fa.glean.pep.trembl.blast.tab.best.v2.0 :  FTP


Synteny and collinearity analysis:

1. all.aligns :  FTP

2. all.blocks :  FTP

3. brachypodium_maize.blocks :  FTP

4. millet_brachypodium.aligns :  FTP

5. millet_brachypodium.blocks :  FTP

6. millet_rice.blocks :  FTP

7. millet_sorghum.blocks :  FTP

8. millet_maize.blocks :  FTP

9. rice_brachypodium.aligns :  FTP

10. rice_brachypodium.blocks :  FTP

11. rice_sorghum.aligns :  FTP

12. rice_sorghum.blocks :  FTP

13. rice_maize.blocks :  FTP

14. sorghum_brachypodium.aligns :  FTP

15. sorghum_maize.blocks :  FTP